Computational Anatomy Software at CIS

The Hopkins Center for Imaging Sciences has developed and released the following software and data sets for use in various research projects. Please follow the respective links to learn more about a project or to download the package. For questions please contact Anthony Kolasny ([email protected]).

• Large Deformation Diffeomorphic Metric Mapping (LDDMM) Suite
• lddmm-volume
• lddmm-surface
• lddmm-similitude
• lddmm-landmark
• lddmm-dti
• Rigid Landmark Matching (RLM) tool
• CAWorks
• BrainWorks
• MindView
• ITK and VTK modules for shape analysis
• Remote Processing Services
• User Guide to Multi-atlas segmentation, with examples
• User Guide to lddmm-cardiac Matching, with examples
• User Guide to Cardiac Template Estimation, with examples
• Coding Standards Documentation